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pofut2 protein O-fucosyltransferase 2 [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114147946, updated on 15-Mar-2024

Summary

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Gene symbol
pofut2
Gene description
protein O-fucosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See pofut2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 7 NC_040234.1 (19573544..19579752)

Chromosome 7 - NC_040234.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha chain-like Neighboring gene tubulin alpha chain-like Neighboring gene ATP-binding cassette, sub-family A (ABC1), member 12 Neighboring gene BRCA1 associated RING domain 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040234.1 Chromosome 7 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040234.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    19573544..19579752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028022767.1 → XP_027878568.1  GDP-fucose protein O-fucosyltransferase 2

    UniProtKB/TrEMBL
    A0A3B5M522
    Conserved Domains (1) summary
    cd11298
    Location:60 → 430
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2
Nucleotide Protein
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