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LOC114144183 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114144183, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114144183
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See LOC114144183 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
16
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 5 NC_040232.1 (22052442..22081715)

Chromosome 5 - NC_040232.1Genomic Context describing neighboring genes Neighboring gene acidic amino acid decarboxylase GADL1-like Neighboring gene acidic amino acid decarboxylase GADL1-like Neighboring gene KIAA1143 ortholog Neighboring gene transmembrane protein 42-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040232.1 Chromosome 5 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040232.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    22052442..22081715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028016726.1 → XP_027872527.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like

    UniProtKB/TrEMBL
    A0A3B5MP71, A0A3B5MTU4
    Conserved Domains (1) summary
    pfam02516
    Location:58 → 550
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
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