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large2 LARGE xylosyl- and glucuronyltransferase 2 [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114142928, updated on 15-Mar-2024

Summary

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Gene symbol
large2
Gene description
LARGE xylosyl- and glucuronyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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See large2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 4 NC_040231.1 (2136573..2210134)

Chromosome 4 - NC_040231.1Genomic Context describing neighboring genes Neighboring gene titin homolog Neighboring gene uncharacterized LOC114143744 Neighboring gene G2/M phase-specific E3 ubiquitin-protein ligase-like Neighboring gene uncharacterized LOC114142429 Neighboring gene nuclear receptor ROR-alpha A-like Neighboring gene uncharacterized LOC114143418

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040231.1 Chromosome 4 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LARGE xylosyl- and glucuronyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040231.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    2136573..2210134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028014520.1 → XP_027870321.1  LARGE xylosyl- and glucuronyltransferase 2

    Conserved Domains (2) summary
    cd06431
    Location:131 → 410
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:466 → 735
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  2. XM_028014524.1 → XP_027870325.1  LARGE xylosyl- and glucuronyltransferase 2

    Conserved Domains (2) summary
    cd06431
    Location:131 → 410
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:466 → 735
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  3. XM_028014522.1 → XP_027870323.1  LARGE xylosyl- and glucuronyltransferase 2

    Conserved Domains (2) summary
    cd06431
    Location:131 → 410
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:466 → 735
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  4. XM_028014523.1 → XP_027870324.1  LARGE xylosyl- and glucuronyltransferase 2

    Conserved Domains (2) summary
    cd06431
    Location:131 → 410
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:466 → 735
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  5. XM_028014525.1 → XP_027870326.1  LARGE xylosyl- and glucuronyltransferase 2

    Conserved Domains (2) summary
    cd06431
    Location:131 → 410
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:466 → 735
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
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