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chs1 chitin synthase 1 [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114142915, updated on 26-Jun-2024

Summary

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Gene symbol
chs1
Gene description
chitin synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 4
Exon count:
36
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 4 NC_040231.1 (13599406..13621600, complement)

Chromosome 4 - NC_040231.1Genomic Context describing neighboring genes Neighboring gene globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like Neighboring gene DEAD (Asp-Glu-Ala-Asp) box helicase 21 Neighboring gene CUB and Sushi multiple domains 1 Neighboring gene uncharacterized LOC114143176 Neighboring gene uncharacterized LOC114143175

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040231.1 Chromosome 4 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitin synthase chs-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040231.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    13599406..13621600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028014488.1 → XP_027870289.1  chitin synthase chs-2-like

    UniProtKB/TrEMBL
    A0A3B5LPW2
    Conserved Domains (2) summary
    COG1215
    Location:670 → 1003
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    cl11394
    Location:487 → 827
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases