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b4galt1l DP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, like [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114139607, updated on 12-Sep-2024

Summary

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Gene symbol
b4galt1l
Gene description
DP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, like
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
b4galt1
Orthologs
zebrafish all
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Genomic context

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See b4galt1l in Genome Data Viewer
Location:
chromosome: 23
Exon count:
6
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 23 NC_040250.1 (283461..291397, complement)

Chromosome 23 - NC_040250.1Genomic Context describing neighboring genes Neighboring gene transforming growth factor, beta-induced Neighboring gene exosome component 3 Neighboring gene RE1-silencing transcription factor Neighboring gene uncharacterized LOC114139608 Neighboring gene proteoglycan 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040250.1 Chromosome 23 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040250.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    283461..291397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028009637.1 → XP_027865438.1  beta-1,4-galactosyltransferase 1

    Conserved Domains (1) summary
    cd00899
    Location:146 → 363
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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