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LOC11409103 xyloglucan galactosyltransferase KATAMARI1 homolog [ Medicago truncatula (barrel medic) ]

Gene ID: 11409103, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11409103
Gene description
xyloglucan galactosyltransferase KATAMARI1 homolog
Locus tag
MtrunA17_Chr3g0078741
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC11409103 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 3 NC_053044.1 (1260958..1262288)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 3 NC_016409.2 (1210326..1211656)

Chromosome 3 - NC_053044.1Genomic Context describing neighboring genes Neighboring gene protein MAIN-LIKE 2-like Neighboring gene F-box/LRR-repeat protein At3g26922 Neighboring gene nicotinamide/nicotinic acid mononucleotide adenylyltransferase Neighboring gene probable L-type lectin-domain containing receptor kinase S.7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan galactosyltransferase KATAMARI1 homolog
Names
putative exostosin
xyloglucan galactosyltransferase KATAMARI-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053044.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    1260958..1262288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003598102.2 → XP_003598150.2  xyloglucan galactosyltransferase KATAMARI1 homolog

    UniProtKB/TrEMBL
    G7IVC8
    Conserved Domains (1) summary
    pfam03016
    Location:33 → 343
    Exostosin; Exostosin family
Nucleotide Protein
Heading Accession and Version

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