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FUT9 fucosyltransferase 9 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 114022634, updated on 15-Mar-2024

Summary

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Gene symbol
FUT9
Gene description
fucosyltransferase 9
Locus tag
UY3_00281
See related
EnsemblRapid:ENSCMYG00015001711
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See FUT9 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 3 NC_057851.1 (70403506..70520897)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 3 NC_051243.1 (70403488..70472065)

Chromosome 3 - NC_057851.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122464808 Neighboring gene mannosidase endo-alpha Neighboring gene uncharacterized LOC122464999 Neighboring gene UFM1 specific ligase 1 Neighboring gene four and a half LIM domains 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9
Names
Alpha-(1,3)-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057851.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    70403506..70520897
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043542667.1 → XP_043398602.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9

    UniProtKB/TrEMBL
    M7CMI6

RNA

  1. XR_005224649.2 RNA Sequence

  2. XR_006289494.1 RNA Sequence

  3. XR_006289495.1 RNA Sequence

  4. XR_006289493.1 RNA Sequence

    Related
    ENSCMYT00015003152.1

  5. XR_006289491.1 RNA Sequence

  6. XR_006289492.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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