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GMPPB GDP-mannose pyrophosphorylase B [ Chelonia mydas (Green sea turtle) ]

Gene ID: 114019964, updated on 15-Mar-2024

Summary

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Gene symbol
GMPPB
Gene description
GDP-mannose pyrophosphorylase B
Locus tag
UY3_08884
See related
EnsemblRapid:ENSCMYG00015010855
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See GMPPB in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 7 NC_057853.1 (50431412..50442034)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 7 NC_051247.1 (50431361..50442035)

Chromosome 7 - NC_057853.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122466557 Neighboring gene ferritin heavy chain-like Neighboring gene inositol hexakisphosphate kinase 1 Neighboring gene ring finger protein 123 Neighboring gene adhesion molecule with Ig like domain 3 Neighboring gene probable protein BRICK1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannose-1-phosphate guanylyltransferase (GTP) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-mannose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell wall mannoprotein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: mannose-1-phosphate guanyltransferase beta
Names
Mannose-1-phosphate guanyltransferase beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057853.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    50431412..50442034
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037903694.2 → XP_037759622.1  LOW QUALITY PROTEIN: mannose-1-phosphate guanyltransferase beta

    UniProtKB/TrEMBL
    M7B9Y6
    Related
    ENSCMYP00015016872.1, ENSCMYT00015020413.1
    Conserved Domains (2) summary
    cd06425
    Location:1 → 233
    M1P_guanylylT_B_like_N; N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins
    cl00160
    Location:255 → 334
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
Nucleotide Protein
Heading Accession and Version

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