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BCKDHA branched chain keto acid dehydrogenase E1 subunit alpha [ Zalophus californianus (California sea lion) ]

Gene ID: 113935712, updated on 11-Apr-2024

Summary

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Gene symbol
BCKDHA
Gene description
branched chain keto acid dehydrogenase E1 subunit alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See BCKDHA in Genome Data Viewer
Location:
chromosome: 17
Exon count:
10
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 17 NC_045611.1 (47929474..47948509)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874921.1 (12135392..12154431, complement)

Chromosome 17 - NC_045611.1Genomic Context describing neighboring genes Neighboring gene B9 domain containing 2 Neighboring gene transmembrane protein 91 Neighboring gene exosome component 5 Neighboring gene uncharacterized LOC113935719 Neighboring gene uncharacterized LOC113935718 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 Neighboring gene uncharacterized LOC113935717 Neighboring gene distal membrane arm assembly component 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
Names
branched chain keto acid dehydrogenase E1, alpha polypeptide

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045611.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    47929474..47948509
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027618074.1 → XP_027473875.1  2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6J2EXV2

  2. XM_027618073.1 → XP_027473874.1  2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6J2EYD6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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