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PLA2G4A phospholipase A2 group IVA [ Zalophus californianus (California sea lion) ]

Gene ID: 113933605, updated on 15-Mar-2024

Summary

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Gene symbol
PLA2G4A
Gene description
phospholipase A2 group IVA
See related
EnsemblRapid:ENSZCAG00025012527
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See PLA2G4A in Genome Data Viewer
Location:
chromosome: 10
Exon count:
21
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 10 NC_045604.1 (47407209..47576979)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874544.1 (62045168..62213987, complement)

Chromosome 10 - NC_045604.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113933517 Neighboring gene prostaglandin-endoperoxide synthase 2 Neighboring gene nuclear nucleic acid-binding protein C1D-like Neighboring gene BAG family molecular chaperone regulator 2-like Neighboring gene complement factor H-related protein 2-like Neighboring gene protein BUD31 homolog Neighboring gene cytochrome c oxidase subunit 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045604.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    47407209..47576979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027613899.2 → XP_027469700.1  cytosolic phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A6J2EL43
    Related
    ENSZCAP00025019685.1, ENSZCAT00025022372.1
    Conserved Domains (2) summary
    cd07200
    Location:144 → 730
    cPLA2_Grp-IVA; Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cd04036
    Location:20 → 138
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)

  2. XM_027613902.2 → XP_027469703.1  cytosolic phospholipase A2 isoform X3

    UniProtKB/TrEMBL
    A0A6J2EVU6

  3. XM_027613901.2 → XP_027469702.1  cytosolic phospholipase A2 isoform X2

    UniProtKB/TrEMBL
    A0A6J2ES66

  4. XM_027613903.2 → XP_027469704.1  cytosolic phospholipase A2 isoform X4

    UniProtKB/TrEMBL
    A0A6J2EL57
Nucleotide Protein
Heading Accession and Version

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