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UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 [ Zalophus californianus (California sea lion) ]

Gene ID: 113932522, updated on 15-Mar-2024

Summary

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Gene symbol
UAP1
Gene description
UDP-N-acetylglucosamine pyrophosphorylase 1
See related
EnsemblRapid:ENSZCAG00025014256
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See UAP1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 10 NC_045604.1 (6904765..6940633)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874544.1 (102496797..102530951, complement)

Chromosome 10 - NC_045604.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113931911 Neighboring gene U2AF homology motif kinase 1 Neighboring gene uncharacterized LOC113932523 Neighboring gene discoidin domain receptor tyrosine kinase 2 Neighboring gene hydroxysteroid 17-beta dehydrogenase 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-N-acetylglucosamine diphosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-N-acetylglucosamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylhexosamine pyrophosphorylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045604.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    6904765..6940633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027611814.2 → XP_027467615.1  UDP-N-acetylhexosamine pyrophosphorylase isoform X4

    UniProtKB/TrEMBL
    A0A6J2EF97
    Related
    ENSZCAP00025022467.1, ENSZCAT00025025477.1

  2. XM_027611812.2 → XP_027467613.1  UDP-N-acetylhexosamine pyrophosphorylase isoform X2

    UniProtKB/TrEMBL
    A0A6J2EPZ7

  3. XM_027611811.2 → XP_027467612.1  UDP-N-acetylhexosamine pyrophosphorylase isoform X1

    UniProtKB/TrEMBL
    A0A6J2EL67
    Related
    ENSZCAP00025022420.1, ENSZCAT00025025429.1

  4. XM_027611813.2 → XP_027467614.1  UDP-N-acetylhexosamine pyrophosphorylase isoform X3

    UniProtKB/TrEMBL
    A0A6J2EFA5
    Related
    ENSZCAP00025022441.1, ENSZCAT00025025450.1
    Conserved Domains (1) summary
    cd04193
    Location:88 → 410
    UDPGlcNAc_PPase; UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc

RNA

  1. XR_003523095.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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