U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LPGAT1 lysophosphatidylglycerol acyltransferase 1 [ Zalophus californianus (California sea lion) ]

Gene ID: 113931796, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
LPGAT1
Gene description
lysophosphatidylglycerol acyltransferase 1
See related
EnsemblRapid:ENSZCAG00025013378
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LPGAT1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
10
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 10 NC_045604.1 (37433748..37553696, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874544.1 (71978545..72098556)

Chromosome 10 - NC_045604.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 30 member 1 Neighboring gene NIMA related kinase 2 Neighboring gene cyclin-dependent kinase 1 Neighboring gene integrator complex subunit 7 Neighboring gene denticleless E3 ubiquitin protein ligase homolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
acyl-CoA:lysophosphatidylglycerol acyltransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045604.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    37433748..37553696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027609830.2 → XP_027465631.2  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6J2EBL2
    Conserved Domains (2) summary
    cd07990
    Location:119 → 335
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:324 → 377
    Acyltransf_C; Acyltransferase C-terminus

  2. XM_027609831.2 → XP_027465632.2  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A6J2EFH8
    Related
    ENSZCAP00025021020.1, ENSZCAT00025023855.1
    Conserved Domains (2) summary
    cd07990
    Location:69 → 285
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:274 → 327
    Acyltransf_C; Acyltransferase C-terminus

  3. XM_027609832.2 → XP_027465633.2  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A6J2EJ74
    Conserved Domains (1) summary
    cd07990
    Location:119 → 334
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.