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GNPDA1 glucosamine-6-phosphate deaminase 1 [ Zalophus californianus (California sea lion) ]

Gene ID: 113929347, updated on 15-Mar-2024

Summary

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Gene symbol
GNPDA1
Gene description
glucosamine-6-phosphate deaminase 1
See related
EnsemblRapid:ENSZCAG00025009124
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See GNPDA1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 5 NC_045599.1 (34586982..34598191, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874474.1 (118404826..118416038)

Chromosome 5 - NC_045599.1Genomic Context describing neighboring genes Neighboring gene DAP3 binding cell death enhancer 1 Neighboring gene protocadherin 12 Neighboring gene ring finger protein 14 Neighboring gene tubulin beta chain-like Neighboring gene Nedd4 family interacting protein 1 Neighboring gene sprouty RTK signaling antagonist 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosamine-6-phosphate isomerase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045599.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    34586982..34598191 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027606185.1 → XP_027461986.1  glucosamine-6-phosphate isomerase 1 isoform X2

    UniProtKB/TrEMBL
    A0A6J2E1L9
    Related
    ENSZCAP00025014169.1, ENSZCAT00025016144.1
    Conserved Domains (1) summary
    PRK00443
    Location:1 → 258
    nagB; glucosamine-6-phosphate deaminase; Provisional

  2. XM_027606184.1 → XP_027461985.1  glucosamine-6-phosphate isomerase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6J2DZJ0
    Related
    ENSZCAP00025014129.1, ENSZCAT00025016101.1
    Conserved Domains (1) summary
    PRK00443
    Location:16 → 273
    nagB; glucosamine-6-phosphate deaminase; Provisional
Nucleotide Protein
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