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UGDH UDP-glucose 6-dehydrogenase [ Zalophus californianus (California sea lion) ]

Gene ID: 113925260, updated on 15-Mar-2024

Summary

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Gene symbol
UGDH
Gene description
UDP-glucose 6-dehydrogenase
See related
EnsemblRapid:ENSZCAG00025009349
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See UGDH in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 2 NC_045596.1 (32603144..32635082, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874464.1 (168457749..168489690)

Chromosome 2 - NC_045596.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L9 Neighboring gene lipoic acid synthetase Neighboring gene small integral membrane protein 14 Neighboring gene uncharacterized LOC113925014

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-glucose 6-dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucose 6-dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045596.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    32603144..32635082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027599889.2 → XP_027455690.1  UDP-glucose 6-dehydrogenase isoform X1

    UniProtKB/TrEMBL
    A0A6J2DGS9
    Related
    ENSZCAP00025014562.1, ENSZCAT00025016580.1

  2. XM_027599891.2 → XP_027455692.1  UDP-glucose 6-dehydrogenase isoform X3

    UniProtKB/TrEMBL
    A0A6J2DLL5
    Related
    ENSZCAP00025014572.1, ENSZCAT00025016591.1

  3. XM_027599888.2 → XP_027455689.1  UDP-glucose 6-dehydrogenase isoform X1

    UniProtKB/TrEMBL
    A0A6J2DGS9

  4. XM_027599892.2 → XP_027455693.1  UDP-glucose 6-dehydrogenase isoform X4

    UniProtKB/TrEMBL
    A0A6J2DN76
    Conserved Domains (1) summary
    PLN02353
    Location:1 → 367
    PLN02353; probable UDP-glucose 6-dehydrogenase

  5. XM_027599890.2 → XP_027455691.1  UDP-glucose 6-dehydrogenase isoform X2

    UniProtKB/TrEMBL
    A0A6J2DJ45
    Related
    ENSZCAP00025014548.1, ENSZCAT00025016565.1
    Conserved Domains (1) summary
    PLN02353
    Location:4 → 464
    PLN02353; probable UDP-glucose 6-dehydrogenase
Nucleotide Protein
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