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SMC3 structural maintenance of chromosomes 3 [ Zalophus californianus (California sea lion) ]

Gene ID: 113923633, updated on 15-Mar-2024

Summary

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Gene symbol
SMC3
Gene description
structural maintenance of chromosomes 3
See related
EnsemblRapid:ENSZCAG00025020307
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See SMC3 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
29
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 15 NC_045609.1 (68938793..68977852)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874462.1 (19783643..19822731, complement)

Chromosome 15 - NC_045609.1Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase 5 Neighboring gene 5S ribosomal RNA Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene 60S ribosomal protein L34-like Neighboring gene RNA binding motif protein 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cohesin loader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic sister chromatid cohesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
structural maintenance of chromosomes protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045609.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    68938793..68977852
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027596605.1 → XP_027452406.1  structural maintenance of chromosomes protein 3

    UniProtKB/TrEMBL
    A0A6J2D9N6
    Related
    ENSZCAP00025031942.1, ENSZCAT00025036121.1
    Conserved Domains (1) summary
    COG1196
    Location:1 → 1194
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
Heading Accession and Version

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