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CHKB choline kinase beta [ Zalophus californianus (California sea lion) ]

Gene ID: 113922399, updated on 15-Mar-2024

Summary

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Gene symbol
CHKB
Gene description
choline kinase beta
See related
EnsemblRapid:ENSZCAG00025011956
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See CHKB in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 9 NC_045603.1 (176930..180363)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020884870.1 (135445132..135448564)

Chromosome 9 - NC_045603.1Genomic Context describing neighboring genes Neighboring gene arylsulfatase A Neighboring gene mitogen-activated protein kinase 8 interacting protein 2 Neighboring gene carnitine palmitoyltransferase 1B Neighboring gene uncharacterized LOC113922493

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolamine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline/ethanolamine kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045603.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    176930..180363
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027594301.1 → XP_027450102.1  choline/ethanolamine kinase isoform X1

    UniProtKB/TrEMBL
    A0A6J2D5I8

  2. XM_027594302.1 → XP_027450103.1  choline/ethanolamine kinase isoform X2

    UniProtKB/TrEMBL
    A0A6J2D723
    Related
    ENSZCAP00025018870.1, ENSZCAT00025021369.1
    Conserved Domains (1) summary
    cd05156
    Location:109 → 425
    ChoK_euk; Euykaryotic Choline Kinase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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