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CPT1B carnitine palmitoyltransferase 1B [ Zalophus californianus (California sea lion) ]

Gene ID: 113922398, updated on 15-Mar-2024

Summary

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Gene symbol
CPT1B
Gene description
carnitine palmitoyltransferase 1B
See related
EnsemblRapid:ENSZCAG00025011970
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See CPT1B in Genome Data Viewer
Location:
chromosome: 9
Exon count:
19
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 9 NC_045603.1 (180642..188548)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020884870.1 (135448843..135456749)

Chromosome 9 - NC_045603.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 8 interacting protein 2 Neighboring gene choline kinase beta Neighboring gene uncharacterized LOC113922493 Neighboring gene synaptonemal complex central element protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 1, muscle isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045603.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    180642..188548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027594298.1 → XP_027450099.1  carnitine O-palmitoyltransferase 1, muscle isoform isoform X1

    UniProtKB/TrEMBL
    A0A6J2D1Y2

  2. XM_027594299.2 → XP_027450100.2  carnitine O-palmitoyltransferase 1, muscle isoform isoform X2

    UniProtKB/TrEMBL
    A0A6J2D0Z5
    Related
    ENSZCAP00025018901.1, ENSZCAT00025021401.1
    Conserved Domains (2) summary
    pfam00755
    Location:173 → 761
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 47
    CPT_N; Carnitine O-palmitoyltransferase N-terminus

  3. XM_027594300.2 → XP_027450101.2  carnitine O-palmitoyltransferase 1, muscle isoform isoform X3

    UniProtKB/TrEMBL
    A0A6J2D310
    Conserved Domains (1) summary
    pfam00755
    Location:65 → 653
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
Nucleotide Protein
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