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PSAP prosaposin [ Zalophus californianus (California sea lion) ]

Gene ID: 113921867, updated on 15-Mar-2024

Summary

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Gene symbol
PSAP
Gene description
prosaposin
See related
EnsemblRapid:ENSZCAG00025023645
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See PSAP in Genome Data Viewer
Location:
chromosome: 15
Exon count:
15
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 15 NC_045609.1 (32801796..32830509, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874462.1 (55092330..55121060)

Chromosome 15 - NC_045609.1Genomic Context describing neighboring genes Neighboring gene cadherin related 23 Neighboring gene chromosome 15 C10orf105 homolog Neighboring gene V-set immunoregulatory receptor Neighboring gene U6 spliceosomal RNA Neighboring gene carbohydrate sulfotransferase 3 Neighboring gene SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in sphingolipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prosaposin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045609.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    32801796..32830509 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027593268.2 → XP_027449069.1  prosaposin isoform X3

    UniProtKB/TrEMBL
    A0A6J2CZ06
    Related
    ENSZCAP00025037412.1, ENSZCAT00025042220.1
    Conserved Domains (2) summary
    smart00162
    Location:21 → 54
    SAPA; Saposin/surfactant protein-B A-type DOMAIN
    smart00741
    Location:315 → 388
    SapB; Saposin (B) Domains

  2. XM_027593259.2 → XP_027449060.1  prosaposin isoform X2

    UniProtKB/TrEMBL
    A0A6J2CXU3

  3. XM_027593249.2 → XP_027449050.1  prosaposin isoform X1

    UniProtKB/TrEMBL
    A0A6J2CXT6
    Conserved Domains (2) summary
    smart00162
    Location:21 → 54
    SAPA; Saposin/surfactant protein-B A-type DOMAIN
    smart00741
    Location:318 → 391
    SapB; Saposin (B) Domains
Nucleotide Protein
Heading Accession and Version

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