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PFKM phosphofructokinase, muscle [ Zalophus californianus (California sea lion) ]

Gene ID: 113921715, updated on 15-Mar-2024

Summary

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Gene symbol
PFKM
Gene description
phosphofructokinase, muscle
See related
EnsemblRapid:ENSZCAG00025022552
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See PFKM in Genome Data Viewer
Location:
chromosome: 9
Exon count:
28
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 9 NC_045603.1 (65451901..65499271, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020884870.1 (72505785..72553306)

Chromosome 9 - NC_045603.1Genomic Context describing neighboring genes Neighboring gene ERO1-like protein alpha Neighboring gene ankyrin repeat and SOCS box containing 8 Neighboring gene SUMO specific peptidase 1 Neighboring gene collagen type II alpha 1 chain Neighboring gene transmembrane protein 106C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 6-phosphofructokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables AMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fructose-6-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monosaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical glycolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fructose 1,6-bisphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fructose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 6-phosphofructokinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent 6-phosphofructokinase, muscle type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045603.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    65451901..65499271 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027592757.1 → XP_027448558.1  ATP-dependent 6-phosphofructokinase, muscle type isoform X1

    UniProtKB/TrEMBL
    A0A6J2CYR1
    Related
    ENSZCAP00025035768.1, ENSZCAT00025040375.1

  2. XM_027592759.2 → XP_027448560.1  ATP-dependent 6-phosphofructokinase, muscle type isoform X2

    UniProtKB/TrEMBL
    A0A6J2CXP2
    Related
    ENSZCAP00025035673.1, ENSZCAT00025040275.1

  3. XM_027592755.1 → XP_027448556.1  ATP-dependent 6-phosphofructokinase, muscle type isoform X1

    UniProtKB/TrEMBL
    A0A6J2CYR1

  4. XM_027592756.1 → XP_027448557.1  ATP-dependent 6-phosphofructokinase, muscle type isoform X1

    UniProtKB/TrEMBL
    A0A6J2CYR1

  5. XM_027592758.1 → XP_027448559.1  ATP-dependent 6-phosphofructokinase, muscle type isoform X2

    UniProtKB/TrEMBL
    A0A6J2CXP2
Nucleotide Protein
Heading Accession and Version

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