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MMADHC metabolism of cobalamin associated D [ Zalophus californianus (California sea lion) ]

Gene ID: 113919710, updated on 15-Mar-2024

Summary

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Gene symbol
MMADHC
Gene description
metabolism of cobalamin associated D
See related
EnsemblRapid:ENSZCAG00025013490
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See MMADHC in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 3 NC_045597.1 (115674970..115720376, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020884869.1 (79541097..79587090)

Chromosome 3 - NC_045597.1Genomic Context describing neighboring genes Neighboring gene LY6/PLAUR domain containing 6B Neighboring gene LY6/PLAUR domain containing 6 Neighboring gene uncharacterized LOC113919713 Neighboring gene uncharacterized LOC113919712 Neighboring gene U2 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cobalamin trafficking protein CblD

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045597.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    115674970..115720376 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027589284.2 → XP_027445085.1  cobalamin trafficking protein CblD isoform X1

    UniProtKB/TrEMBL
    A0A6J2CL66

  2. XM_027589287.2 → XP_027445088.1  cobalamin trafficking protein CblD isoform X2

    UniProtKB/TrEMBL
    A0A6J2CQX2
    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  3. XM_027589286.2 → XP_027445087.1  cobalamin trafficking protein CblD isoform X2

    UniProtKB/TrEMBL
    A0A6J2CQX2
    Related
    ENSZCAP00025021212.1, ENSZCAT00025024058.1
    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  4. XM_027589285.2 → XP_027445086.1  cobalamin trafficking protein CblD isoform X2

    UniProtKB/TrEMBL
    A0A6J2CQX2
    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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