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B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) [ Zalophus californianus (California sea lion) ]

Gene ID: 113918056, updated on 15-Mar-2024

Summary

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Gene symbol
B3GALNT1
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See B3GALNT1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 1 NC_045595.1 (114688949..114713776, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020884868.1 (99938901..99963729)

Chromosome 1 - NC_045595.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1L Neighboring gene elongation factor 1-alpha 1-like Neighboring gene pancreatic progenitor cell differentiation and proliferation factor-like Neighboring gene 40S ribosomal protein SA-like Neighboring gene U6 spliceosomal RNA Neighboring gene 40S ribosomal protein SA-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045595.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    114688949..114713776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027586226.2 → XP_027442027.2  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P9EYZ3
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  2. XM_035722912.1 → XP_035578805.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P9EYZ3
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  3. XM_027586228.2 → XP_027442029.2  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P9EYZ3
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  4. XM_035722915.1 → XP_035578808.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P9EYZ3
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  5. XM_027586231.2 → XP_027442032.2  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P9EYZ3
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  6. XM_027586223.2 → XP_027442024.2  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P9EYZ3
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  7. XM_027586230.2 → XP_027442031.2  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P9EYZ3
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  8. XM_027586227.2 → XP_027442028.2  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P9EYZ3
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  9. XM_035722914.1 → XP_035578807.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P9EYZ3
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  10. XM_035722911.1 → XP_035578804.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P9EYZ3
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  11. XM_027586229.2 → XP_027442030.2  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A6P9EYZ3
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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