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KIRREL3 kirre like nephrin family adhesion molecule 3 [ Zalophus californianus (California sea lion) ]

Gene ID: 113914665, updated on 15-Mar-2024

Summary

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Gene symbol
KIRREL3
Gene description
kirre like nephrin family adhesion molecule 3
See related
EnsemblRapid:ENSZCAG00025011345
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See KIRREL3 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
18
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 11 NC_045605.1 (22044614..22584423, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020879070.1 (89683235..90222680)

Chromosome 11 - NC_045605.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113914777 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4 Neighboring gene uncharacterized LOC113914666 Neighboring gene probable UDP-sugar transporter protein SLC35A4 Neighboring gene SLC35A4 upstream open reading frame protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045605.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    22044614..22584423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027580085.2 → XP_027435886.2  LOW QUALITY PROTEIN: kin of IRRE-like protein 3

    UniProtKB/TrEMBL
    A0A6J2BXU7
    Related
    ENSZCAP00025017962.1, ENSZCAT00025020341.1
    Conserved Domains (4) summary
    cd00096
    Location:343 → 347
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:149 → 246
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:418 → 515
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:335 → 416
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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