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SC5D sterol-C5-desaturase [ Zalophus californianus (California sea lion) ]

Gene ID: 113914200, updated on 15-Mar-2024

Summary

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Gene symbol
SC5D
Gene description
sterol-C5-desaturase
See related
EnsemblRapid:ENSZCAG00025014315
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See SC5D in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 11 NC_045605.1 (17418662..17432102)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020879070.1 (94779148..94792793, complement)

Chromosome 11 - NC_045605.1Genomic Context describing neighboring genes Neighboring gene tubulin-specific chaperone cofactor E-like protein Neighboring gene uncharacterized LOC113914202 Neighboring gene uncharacterized LOC113914201 Neighboring gene uncharacterized LOC113914992

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process via lathosterol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lathosterol oxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045605.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    17418662..17432102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027579202.1 → XP_027435003.1  lathosterol oxidase

    UniProtKB/TrEMBL
    A0A6J2BSZ5
    Related
    ENSZCAP00025022502.1, ENSZCAT00025025515.1

  2. XM_027579203.2 → XP_027435004.1  lathosterol oxidase

    UniProtKB/TrEMBL
    A0A6J2BSZ5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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