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GALE UDP-galactose-4-epimerase [ Zalophus californianus (California sea lion) ]

Gene ID: 113912689, updated on 15-Mar-2024

Summary

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Gene symbol
GALE
Gene description
UDP-galactose-4-epimerase
See related
EnsemblRapid:ENSZCAG00025019781
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See GALE in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 4 NC_045598.1 (17629252..17636318, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874458.1 (169946426..169953473)

Chromosome 4 - NC_045598.1Genomic Context describing neighboring genes Neighboring gene PITH domain containing 1 Neighboring gene lysophospholipase 2 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA lyase Neighboring gene alpha-L-fucosidase 1 Neighboring gene cannabinoid receptor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose 4-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactose catabolic process via UDP-galactose IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucose 4-epimerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045598.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    17629252..17636318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027576324.2 → XP_027432125.1  UDP-glucose 4-epimerase

    UniProtKB/TrEMBL
    A0A6J2BMH1
    Related
    ENSZCAP00025031268.1, ENSZCAT00025035379.1
    Conserved Domains (1) summary
    cd05247
    Location:4 → 338
    UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

  2. XM_027576400.2 → XP_027432201.1  UDP-glucose 4-epimerase

    UniProtKB/TrEMBL
    A0A6J2BMH1
    Conserved Domains (1) summary
    cd05247
    Location:4 → 338
    UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs
Nucleotide Protein
Heading Accession and Version

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