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GALK1 galactokinase 1 [ Zalophus californianus (California sea lion) ]

Gene ID: 113907935, updated on 15-Mar-2024

Summary

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Gene symbol
GALK1
Gene description
galactokinase 1
See related
EnsemblRapid:ENSZCAG00025017667
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See GALK1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
9
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 16 NC_045610.1 (57086192..57092549, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020875730.1 (5556129..5562486)

Chromosome 16 - NC_045610.1Genomic Context describing neighboring genes Neighboring gene SAP30 binding protein Neighboring gene integrin subunit beta 4 Neighboring gene histone H3.3A Neighboring gene unk zinc finger Neighboring gene unc-13 homolog D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactokinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045610.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    57086192..57092549 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027567719.1 → XP_027423520.1  galactokinase isoform X2

    UniProtKB/TrEMBL
    A0A6J2AVA3

  2. XM_027567721.1 → XP_027423522.1  galactokinase isoform X3

    UniProtKB/TrEMBL
    A0A6J2AZZ7

  3. XM_027567718.2 → XP_027423519.1  galactokinase isoform X1

    UniProtKB/TrEMBL
    A0A6J2AVQ8
    Related
    ENSZCAP00025027604.1, ENSZCAT00025031299.1
    Conserved Domains (1) summary
    COG0153
    Location:11 → 390
    GalK; Galactokinase [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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