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SPACA3 sperm acrosome associated 3 [ Zalophus californianus (California sea lion) ]

Gene ID: 113907905, updated on 15-Mar-2024

Summary

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Gene symbol
SPACA3
Gene description
sperm acrosome associated 3
See related
EnsemblRapid:ENSZCAG00025019982
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See SPACA3 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
7
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 16 NC_045610.1 (20864270..20880089)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020875730.1 (39406101..39421919, complement)

Chromosome 16 - NC_045610.1Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene transmembrane protein 98 Neighboring gene acid sensing ion channel subunit 2 Neighboring gene THAP domain-containing protein 2-like Neighboring gene uncharacterized LOC113907991

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysozyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm flagellum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sperm acrosome membrane-associated protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045610.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    20864270..20880089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027567647.2 → XP_027423448.1  sperm acrosome membrane-associated protein 3

    UniProtKB/TrEMBL
    A0A6J2B0K8
    Conserved Domains (1) summary
    cd16897
    Location:36 → 161
    LYZ_C; C-type lysozyme

  2. XM_027567642.1 → XP_027423443.1  sperm acrosome membrane-associated protein 3

    UniProtKB/TrEMBL
    A0A6J2B0K8
    Related
    ENSZCAP00025031423.1, ENSZCAT00025035548.1
    Conserved Domains (1) summary
    cd16897
    Location:36 → 161
    LYZ_C; C-type lysozyme

  3. XM_027567643.2 → XP_027423444.1  sperm acrosome membrane-associated protein 3

    UniProtKB/TrEMBL
    A0A6J2B0K8
    Conserved Domains (1) summary
    cd16897
    Location:36 → 161
    LYZ_C; C-type lysozyme

  4. XM_027567644.1 → XP_027423445.1  sperm acrosome membrane-associated protein 3

    UniProtKB/TrEMBL
    A0A6J2B0K8
    Conserved Domains (1) summary
    cd16897
    Location:36 → 161
    LYZ_C; C-type lysozyme

  5. XM_027567645.1 → XP_027423446.1  sperm acrosome membrane-associated protein 3

    UniProtKB/TrEMBL
    A0A6J2B0K8
    Conserved Domains (1) summary
    cd16897
    Location:36 → 161
    LYZ_C; C-type lysozyme
Nucleotide Protein
Heading Accession and Version

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