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LOC113869284 hydroxyproline O-galactosyltransferase HPGT1-like [ Abrus precatorius (Indian licorice) ]

Gene ID: 113869284, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113869284
Gene description
hydroxyproline O-galactosyltransferase HPGT1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Abrus precatorius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Genomic context

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See LOC113869284 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Abrus_2018 (GCF_003935025.1) Unplaced Scaffold NW_020874406.1 (11884197..11891492, complement)

NW_020874406.1Genomic Context describing neighboring genes Neighboring gene probable inactive receptor kinase At4g23740 Neighboring gene putative glucose-6-phosphate 1-epimerase Neighboring gene V-type proton ATPase subunit E-like Neighboring gene uncharacterized LOC113869789

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020874406 Unplaced Scaffold Reference Abrus_2018

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase HPGT1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Abrus precatorius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Abrus_2018

Genomic

  1. NW_020874406.1 Reference Abrus_2018

    Range
    11884197..11891492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027505530.1 → XP_027361331.1  hydroxyproline O-galactosyltransferase HPGT1-like isoform X2

    UniProtKB/TrEMBL
    A0A8B8LY79

  2. XM_027505529.1 → XP_027361330.1  hydroxyproline O-galactosyltransferase HPGT1-like isoform X1

    UniProtKB/TrEMBL
    A0A8B8LYJ1

  3. XM_027505531.1 → XP_027361332.1  hydroxyproline O-galactosyltransferase HPGT1-like isoform X3

    UniProtKB/TrEMBL
    A0A8B8M0I9
Nucleotide Protein
Heading Accession and Version

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