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LOC113855005 probable beta-1,4-xylosyltransferase IRX10L [ Abrus precatorius (Indian licorice) ]

Gene ID: 113855005, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113855005
Gene description
probable beta-1,4-xylosyltransferase IRX10L
Gene type
protein coding
RefSeq status
MODEL
Organism
Abrus precatorius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Genomic context

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See LOC113855005 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Abrus_2018 (GCF_003935025.1) Unplaced Scaffold NW_020874303.1 (17420989..17424673, complement)

NW_020874303.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113855126 Neighboring gene transaldolase-like Neighboring gene phosphatidylinositol transfer protein 3-like Neighboring gene protein UNIFOLIATA-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020874303 Unplaced Scaffold Reference Abrus_2018

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,4-beta-D-xylan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucuronoxylan glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucuronoxylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type secondary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,4-xylosyltransferase IRX10L

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Abrus precatorius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Abrus_2018

Genomic

  1. NW_020874303.1 Reference Abrus_2018

    Range
    17420989..17424673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027486419.1 → XP_027342220.1  probable beta-1,4-xylosyltransferase IRX10L

    UniProtKB/TrEMBL
    A0A8B8KEK6
Nucleotide Protein
Heading Accession and Version

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