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LOC113849859 polygalacturonate 4-alpha-galacturonosyltransferase-like [ Abrus precatorius (Indian licorice) ]

Gene ID: 113849859, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113849859
Gene description
polygalacturonate 4-alpha-galacturonosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Abrus precatorius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Genomic context

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See LOC113849859 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Abrus_2018 (GCF_003935025.1) Unplaced Scaffold NW_020874439.1 (26538632..26546022)

NW_020874439.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113850424 Neighboring gene histone deacetylase complex subunit SAP18 Neighboring gene gibberellin 20 oxidase 1-D-like Neighboring gene glyoxylate/hydroxypyruvate reductase HPR3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020874439 Unplaced Scaffold Reference Abrus_2018

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polygalacturonate 4-alpha-galacturonosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Abrus precatorius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Abrus_2018

Genomic

  1. NW_020874439.1 Reference Abrus_2018

    Range
    26538632..26546022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027480069.1 → XP_027335870.1  polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X3

    UniProtKB/TrEMBL
    A0A8B8JWR2

  2. XM_027480067.1 → XP_027335868.1  polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X1

    UniProtKB/TrEMBL
    A0A8B8JYW0

  3. XM_027480068.1 → XP_027335869.1  polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X2

    UniProtKB/TrEMBL
    A0A8B8JWZ4

  4. XM_027480070.1 → XP_027335871.1  polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X4

    UniProtKB/TrEMBL
    A0A8B8JWY8
Nucleotide Protein
Heading Accession and Version

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