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MIR1843 microRNA 1843 [ Homo sapiens (human) ]

Gene ID: 113839518, updated on 10-Oct-2023

Summary

Official Symbol
MIR1843provided by HGNC
Official Full Name
microRNA 1843provided by HGNC
Primary source
HGNC:HGNC:54161
See related
miRBase:MI0032314; AllianceGenome:HGNC:54161
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

Location:
1q25.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (175968370..175968479, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (175323694..175323803, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (175937506..175937615, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2803 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:175885507-175885694 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:175892848-175893023 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:175903651-175904515 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:175905380-175906244 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:175906245-175907107 Neighboring gene ribosomal protein S29 pseudogene 5 Neighboring gene COP1 E3 ubiquitin ligase Neighboring gene small Cajal body-specific RNA 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:175976701-175977202 Neighboring gene MPRA-validated peak473 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:176065569-176066068 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1569 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1570 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2140 Neighboring gene U7 small nuclear RNA Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:176193870-176194506 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:176194507-176195142 Neighboring gene NANOG hESC enhancer GRCh37_chr1:176196158-176197147 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:176198991-176199490 Neighboring gene COP1 divergent transcript Neighboring gene ribosomal protein L13 pseudogene 7

Genomic regions, transcripts, and products

General gene information

Other Names

  • hsa-mir-1843

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Cajal body IEA
Inferred from Electronic Annotation
more info
 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_162097.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL590723

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    175968370..175968479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    175323694..175323803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)