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LOC113830472 O-glucosyltransferase rumi homolog [ Penaeus vannamei (Pacific white shrimp) ]

Gene ID: 113830472, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113830472
Gene description
O-glucosyltransferase rumi homolog
Locus tag
C7M84_023528
See related
EnsemblRapid:LOC113830472
Gene type
protein coding
RefSeq status
MODEL
Organism
Penaeus vannamei
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC113830472 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM378908v1 (GCF_003789085.1) Unplaced Scaffold NW_020872641.1 (254409..261514)

NW_020872641.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113830469 Neighboring gene WD repeat-containing protein 18-like Neighboring gene uncharacterized LOC113830473 Neighboring gene uncharacterized LOC113830478

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020872641 Unplaced Scaffold Reference ASM378908v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
O-glucosyltransferase rumi homolog
Names
putative protein O-glucosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Penaeus vannamei Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM378908v1 Primary Assembly

Genomic

  1. NW_020872641.1 Reference ASM378908v1 Primary Assembly

    Range
    254409..261514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027383681.1 → XP_027239482.1  O-glucosyltransferase rumi homolog

    Related
    XP_027239482.1, XM_027383681.1
Nucleotide Protein
Heading Accession and Version

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