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LOC113798263 irregular chiasm C-roughest protein-like [ Dermatophagoides pteronyssinus (European house dust mite) ]

Gene ID: 113798263, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113798263
Gene description
irregular chiasm C-roughest protein-like
See related
EnsemblRapid:LOC113798263
Gene type
protein coding
RefSeq status
MODEL
Organism
Dermatophagoides pteronyssinus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Sarcoptiformes; Astigmata; Psoroptidia; Analgoidea; Pyroglyphidae; Dermatophagoidinae; Dermatophagoides
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Genomic context

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See LOC113798263 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM190122v2 (GCF_001901225.1) Unplaced Scaffold NW_020873125.1 (88831..98366)

NW_020873125.1Genomic Context describing neighboring genes Neighboring gene ryanodine receptor-like Neighboring gene alpha/beta hydrolase domain-containing protein 17B-like Neighboring gene mitochondrial import inner membrane translocase subunit Tim23-like Neighboring gene phosphatidylserine decarboxylase proenzyme, mitochondrial-like Neighboring gene uncharacterized LOC113798267 Neighboring gene RRM1_TatSF1_like and RRM2_TatSF1_like domain-containing protein barc

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020873125 Unplaced Scaffold Reference ASM190122v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dermatophagoides pteronyssinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM190122v2 Primary Assembly

Genomic

  1. NW_020873125.1 Reference ASM190122v2 Primary Assembly

    Range
    88831..98366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027348775.1 → XP_027204576.1  irregular chiasm C-roughest protein-like isoform X2

    UniProtKB/TrEMBL
    A0A6P6YIJ5
    Related
    XP_027204576.1, XM_027348775.1

  2. XM_027348774.1 → XP_027204575.1  irregular chiasm C-roughest protein-like isoform X1

    UniProtKB/TrEMBL
    A0A6P6YH32
    Related
    XP_027204575.1, XM_027348774.1
Nucleotide Protein
Heading Accession and Version

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