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LOC113675653 procollagen galactosyltransferase 1-like [ Pocillopora damicornis ]

Gene ID: 113675653, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113675653
Gene description
procollagen galactosyltransferase 1-like
Locus tag
pdam_00020122
See related
EnsemblRapid:LOC113675653
Gene type
protein coding
RefSeq status
MODEL
Organism
Pocillopora damicornis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Pocillopora
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Genomic context

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See LOC113675653 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM370409v1 (GCF_003704095.1) Unplaced Scaffold NW_020845948.1 (62684..72059)

NW_020845948.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113675657 Neighboring gene uncharacterized LOC113675655 Neighboring gene queuine tRNA-ribosyltransferase accessory subunit 2-like Neighboring gene transfer RNA arginine (anticodon UCG)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020845948 Unplaced Scaffold Reference ASM370409v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pocillopora damicornis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM370409v1 Primary Assembly

Genomic

  1. NW_020845948.1 Reference ASM370409v1 Primary Assembly

    Range
    62684..72059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027192248.1 → XP_027048049.1  procollagen galactosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A3M6V141
    Related
    XP_027048049.1, XM_027192248.1
    Conserved Domains (2) summary
    cd06532
    Location:337 → 521
    Glyco_transf_25; Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of ...
    pfam13704
    Location:51 → 164
    Glyco_tranf_2_4; Glycosyl transferase family 2
Nucleotide Protein
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