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LOC113671251 zeta-sarcoglycan-like [ Pocillopora damicornis ]

Gene ID: 113671251, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113671251
Gene description
zeta-sarcoglycan-like
Locus tag
pdam_00021576
See related
EnsemblRapid:LOC113671251
Gene type
protein coding
RefSeq status
MODEL
Organism
Pocillopora damicornis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Pocillopora
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Genomic context

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See LOC113671251 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM370409v1 (GCF_003704095.1) Unplaced Scaffold NW_020845217.1 (20164..26810, complement)

NW_020845217.1Genomic Context describing neighboring genes Neighboring gene RNA-binding protein 26-like Neighboring gene tumor suppressor candidate 3-like Neighboring gene uncharacterized LOC113671255 Neighboring gene NACHT domain- and WD repeat-containing protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020845217 Unplaced Scaffold Reference ASM370409v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zeta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pocillopora damicornis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM370409v1 Primary Assembly

Genomic

  1. NW_020845217.1 Reference ASM370409v1 Primary Assembly

    Range
    20164..26810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027187454.1 → XP_027043255.1  zeta-sarcoglycan-like

    UniProtKB/TrEMBL
    A0A3M6TZ88
    Related
    XP_027043255.1, XM_027187454.1
    Conserved Domains (1) summary
    pfam04790
    Location:23 → 274
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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