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LOC113669287 chitobiosyldiphosphodolichol beta-mannosyltransferase-like [ Pocillopora damicornis ]

Gene ID: 113669287, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113669287
Gene description
chitobiosyldiphosphodolichol beta-mannosyltransferase-like
Locus tag
pdam_00005406
See related
EnsemblRapid:LOC113669287
Gene type
protein coding
RefSeq status
MODEL
Organism
Pocillopora damicornis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Pocillopora
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Genomic context

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See LOC113669287 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM370409v1 (GCF_003704095.1) Unplaced Scaffold NW_020844818.1 (91431..105833, complement)

NW_020844818.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113669267 Neighboring gene metabotropic glutamate receptor-like Neighboring gene fascin-like Neighboring gene uncharacterized LOC113669289 Neighboring gene monocarboxylate transporter 12-like Neighboring gene polycystic kidney disease protein 1-like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020844818 Unplaced Scaffold Reference ASM370409v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitobiosyldiphosphodolichol beta-mannosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pocillopora damicornis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM370409v1 Primary Assembly

Genomic

  1. NW_020844818.1 Reference ASM370409v1 Primary Assembly

    Range
    91431..105833 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027185290.1 → XP_027041091.1  chitobiosyldiphosphodolichol beta-mannosyltransferase-like isoform X2

    Related
    XP_027041091.1, XM_027185290.1

  2. XM_027185289.1 → XP_027041090.1  chitobiosyldiphosphodolichol beta-mannosyltransferase-like isoform X1

    UniProtKB/TrEMBL
    A0A3M6U3J8
    Related
    XP_027041090.1, XM_027185289.1
    Conserved Domains (1) summary
    cd03816
    Location:31 → 464
    GT1_ALG1_like; This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and ...
Nucleotide Protein
Heading Accession and Version

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