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kptn kaptin (actin binding protein) [ Tachysurus fulvidraco (yellow catfish) ]

Gene ID: 113662899, updated on 10-Apr-2024

Summary

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Gene symbol
kptn
Gene description
kaptin (actin binding protein)
See related
EnsemblRapid:ENSTFUG00005024838
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus fulvidraco
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
Orthologs
human zebrafish all
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Genomic context

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See kptn in Genome Data Viewer
Location:
chromosome: 26
Exon count:
12
Annotation release Status Assembly Chr Location
101 current HZAU_PFXX_2.0 (GCF_022655615.1) 26 NC_062543.1 (15140327..15144566)
100 previous assembly ASM372403v1 (GCF_003724035.1) Unplaced Scaffold NW_020848096.1 (232087..236274)

Chromosome 26 - NC_062543.1Genomic Context describing neighboring genes Neighboring gene single insulin-like growth factor-binding domain protein-2 Neighboring gene cone-rod homeobox Neighboring gene heterogeneous nuclear ribonucleoprotein L Neighboring gene serine and arginine rich splicing factor 7a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tachysurus fulvidraco Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_PFXX_2.0

Genomic

  1. NC_062543.1 Reference HZAU_PFXX_2.0

    Range
    15140327..15144566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027178079.2 → XP_027033880.1  KICSTOR complex protein kaptin isoform X2

    Related
    ENSTFUP00005045611.1, ENSTFUT00005060091.1

  2. XM_027178078.2 → XP_027033879.1  KICSTOR complex protein kaptin isoform X1

    Related
    ENSTFUP00005045609.1, ENSTFUT00005060089.1
Nucleotide Protein
Heading Accession and Version

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