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LOC113661825 cytokine-inducible SH2-containing protein-like [ Tachysurus fulvidraco (yellow catfish) ]

Gene ID: 113661825, updated on 30-Nov-2023

Summary

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Gene symbol
LOC113661825
Gene description
cytokine-inducible SH2-containing protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus fulvidraco
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
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Genomic context

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See LOC113661825 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
101 current HZAU_PFXX_2.0 (GCF_022655615.1) 2 NC_062519.1 (13966711..13969926)
100 previous assembly ASM372403v1 (GCF_003724035.1) Unplaced Scaffold NW_020848078.1 (2862959..2866157, complement)

Chromosome 2 - NC_062519.1Genomic Context describing neighboring genes Neighboring gene RNA pseudouridine synthase D4 Neighboring gene twinfilin actin-binding protein 2b Neighboring gene putative homeodomain transcription factor 1 Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytokine-inducible SH2-containing protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tachysurus fulvidraco Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_PFXX_2.0

Genomic

  1. NC_062519.1 Reference HZAU_PFXX_2.0

    Range
    13966711..13969926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027176288.2 → XP_027032089.1  cytokine-inducible SH2-containing protein-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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