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ndst3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [ Tachysurus fulvidraco (yellow catfish) ]

Gene ID: 113660788, updated on 10-Apr-2024

Summary

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Gene symbol
ndst3
Gene description
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
See related
EnsemblRapid:ENSTFUG00005023151
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus fulvidraco
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
Orthologs
zebrafish all
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Genomic context

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See ndst3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
101 current HZAU_PFXX_2.0 (GCF_022655615.1) 7 NC_062524.1 (17812259..17879716, complement)
100 previous assembly ASM372403v1 (GCF_003724035.1) Unplaced Scaffold NW_020848046.1 (198318..267819, complement)

Chromosome 7 - NC_062524.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113660702 Neighboring gene methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit Neighboring gene serine protease 12 Neighboring gene UDP glycosyltransferase 8 Neighboring gene uncharacterized LOC125145208

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tachysurus fulvidraco Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_PFXX_2.0

Genomic

  1. NC_062524.1 Reference HZAU_PFXX_2.0

    Range
    17812259..17879716 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047816165.1 → XP_047672121.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4

    Related
    ENSTFUP00005043407.1, ENSTFUT00005055985.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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