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ano5a anoctamin 5a [ Tachysurus fulvidraco (yellow catfish) ]

Gene ID: 113660013, updated on 10-Apr-2024

Summary

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Gene symbol
ano5a
Gene description
anoctamin 5a
See related
EnsemblRapid:ENSTFUG00005026094
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus fulvidraco
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
Also known as
ano5
Orthologs
human zebrafish all
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Genomic context

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See ano5a in Genome Data Viewer
Location:
chromosome: 10
Exon count:
24
Annotation release Status Assembly Chr Location
101 current HZAU_PFXX_2.0 (GCF_022655615.1) 10 NC_062527.1 (10172067..10199626)
100 previous assembly ASM372403v1 (GCF_003724035.1) Unplaced Scaffold NW_020848036.1 (4615521..4643225, complement)

Chromosome 10 - NC_062527.1Genomic Context describing neighboring genes Neighboring gene single immunoglobulin and toll-interleukin 1 receptor (TIR) domain Neighboring gene anoctamin-9 Neighboring gene succinate receptor 1-like Neighboring gene solute carrier family 17 member 6a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5
Names
anoctamin 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tachysurus fulvidraco Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_PFXX_2.0

Genomic

  1. NC_062527.1 Reference HZAU_PFXX_2.0

    Range
    10172067..10199626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047819538.1 → XP_047675494.1  anoctamin-5 isoform X4

    Related
    ENSTFUP00005048635.1, ENSTFUT00005064051.1

  2. XM_047819537.1 → XP_047675493.1  anoctamin-5 isoform X1

  3. XM_027173199.2 → XP_027029000.1  anoctamin-5 isoform X3

    Related
    ENSTFUP00005048633.1, ENSTFUT00005064049.1

  4. XM_027173198.2 → XP_027028999.2  anoctamin-5 isoform X2

    Related
    ENSTFUP00005048627.1, ENSTFUT00005064043.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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