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si:dkeyp-82a1.6 torsin-1A-interacting protein 2 [ Tachysurus fulvidraco (yellow catfish) ]

Gene ID: 113655835, updated on 10-Apr-2024

Summary

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Gene symbol
si:dkeyp-82a1.6
Gene description
torsin-1A-interacting protein 2
See related
EnsemblRapid:ENSTFUG00005033841
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus fulvidraco
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
Orthologs
zebrafish all
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Genomic context

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See si:dkeyp-82a1.6 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
101 current HZAU_PFXX_2.0 (GCF_022655615.1) 14 NC_062531.1 (10715093..10720011, complement)
100 previous assembly ASM372403v1 (GCF_003724035.1) Unplaced Scaffold NW_020847972.1 (2591421..2596348, complement)

Chromosome 14 - NC_062531.1Genomic Context describing neighboring genes Neighboring gene DEP domain containing 1a Neighboring gene uncharacterized LOC113655713 Neighboring gene uncharacterized LOC113655834 Neighboring gene aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tachysurus fulvidraco Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_PFXX_2.0

Genomic

  1. NC_062531.1 Reference HZAU_PFXX_2.0

    Range
    10715093..10720011 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027166644.2 → XP_027022445.2  torsin-1A-interacting protein 2 isoform X2

    Related
    ENSTFUP00005058718.1, ENSTFUT00005082274.1

  2. XM_027166643.2 → XP_027022444.2  torsin-1A-interacting protein 2 isoform X1

    Related
    ENSTFUP00005058716.1, ENSTFUT00005082268.1
Nucleotide Protein
Heading Accession and Version

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