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kirrel3a kirre like nephrin family adhesion molecule 3a [ Tachysurus fulvidraco (yellow catfish) ]

Gene ID: 113650342, updated on 10-Apr-2024

Summary

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Gene symbol
kirrel3a
Gene description
kirre like nephrin family adhesion molecule 3a
See related
EnsemblRapid:ENSTFUG00005005607
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus fulvidraco
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
Also known as
kirrel3
Orthologs
human zebrafish all
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Genomic context

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See kirrel3a in Genome Data Viewer
Location:
chromosome: 20
Exon count:
18
Annotation release Status Assembly Chr Location
101 current HZAU_PFXX_2.0 (GCF_022655615.1) 20 NC_062537.1 (2066065..2171411, complement)
100 previous assembly ASM372403v1 (GCF_003724035.1) Unplaced Scaffold NW_020847888.1 (1367743..1469377)

Chromosome 20 - NC_062537.1Genomic Context describing neighboring genes Neighboring gene CXADR-like membrane protein Neighboring gene small fragment nuclease Neighboring gene uncharacterized LOC113650344 Neighboring gene cell wall protein AWA1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3
Names
kirre like nephrin family adhesion molecule 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tachysurus fulvidraco Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_PFXX_2.0

Genomic

  1. NC_062537.1 Reference HZAU_PFXX_2.0

    Range
    2066065..2171411 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027158634.2 → XP_027014435.2  kin of IRRE-like protein 3 isoform X1

    Related
    ENSTFUP00005011975.1, ENSTFUT00005014631.1

  2. XM_027158635.2 → XP_027014436.2  kin of IRRE-like protein 3 isoform X2

    Related
    ENSTFUP00005011988.1, ENSTFUT00005014646.1

  3. XM_027158636.2 → XP_027014437.2  kin of IRRE-like protein 3 isoform X3

  4. XM_047804442.1 → XP_047660398.1  kin of IRRE-like protein 3 isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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