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lama1 laminin, alpha 1 [ Tachysurus fulvidraco (yellow catfish) ]

Gene ID: 113644816, updated on 10-Apr-2024

Summary

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Gene symbol
lama1
Gene description
laminin, alpha 1
See related
EnsemblRapid:ENSTFUG00005025265
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus fulvidraco
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
Orthologs
human zebrafish all
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Genomic context

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See lama1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
63
Annotation release Status Assembly Chr Location
101 current HZAU_PFXX_2.0 (GCF_022655615.1) 3 NC_062520.1 (11443479..11483036)
100 previous assembly ASM372403v1 (GCF_003724035.1) Unplaced Scaffold NW_020847794.1 (5426879..5466546)

Chromosome 3 - NC_062520.1Genomic Context describing neighboring genes Neighboring gene receptor-type tyrosine-protein phosphatase mu-like Neighboring gene leucine rich repeat containing 30a Neighboring gene Rho GTPase activating protein 28 Neighboring gene lethal(3)malignant brain tumor-like protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in blood vessel morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in camera-type eye development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1
Names
laminin subunit alpha 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tachysurus fulvidraco Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_PFXX_2.0

Genomic

  1. NC_062520.1 Reference HZAU_PFXX_2.0

    Range
    11443479..11483036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027149932.2 → XP_027005733.2  laminin subunit alpha-1 isoform X1

    Related
    ENSTFUP00005047071.1, ENSTFUT00005061955.1

  2. XM_047811421.1 → XP_047667377.1  laminin subunit alpha-1 isoform X2

    Related
    ENSTFUP00005046980.1, ENSTFUT00005061864.1
Nucleotide Protein
Heading Accession and Version

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