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pleca plectin a [ Electrophorus electricus (electric eel) ]

Gene ID: 113583288, updated on 18-Jun-2024

Summary

Gene symbol
pleca
Gene description
plectin a
See related
Ensembl:ENSEEEG00000005828
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
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Genomic context

See pleca in Genome Data Viewer
Location:
chromosome: 4
Exon count:
42
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 4 NC_049538.1 (7574228..7661888, complement)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826276.1 (257103..346757, complement)

Chromosome 4 - NC_049538.1Genomic Context describing neighboring genes Neighboring gene epiplakin 1 Neighboring gene uncharacterized LOC113583293 Neighboring gene uncharacterized LOC118241267 Neighboring gene transmembrane protein 74 Neighboring gene eukaryotic translation initiation factor 3, subunit E, b

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ankyrin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in hemidesmosome assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in hemidesmosome IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049538.1 Reference fEleEle1.pri

    Range
    7574228..7661888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035525713.1XP_035381606.1  plectin a isoform X2

    UniProtKB/TrEMBL
    A0A4W4EKB9
    Conserved Domains (11) summary
    PTZ00121
    Location:14432403
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:644737
    SPEC; Spectrin repeats
    smart00250
    Location:35593595
    PLEC; Plectin repeat
    COG1196
    Location:21402742
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:739929
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:11551635
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:41734212
    Plectin; Plectin repeat
    pfam17902
    Location:915981
    SH3_10; SH3 domain
    pfam18373
    Location:10161093
    Spectrin_like; Spectrin like domain
    cd21188
    Location:128259
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:272377
    CH_SF; calponin homology (CH) domain superfamily
  2. XM_035525712.1XP_035381605.1  plectin a isoform X1

    UniProtKB/TrEMBL
    A0A4W4EKB9
    Conserved Domains (11) summary
    PTZ00121
    Location:14552415
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:656749
    SPEC; Spectrin repeats
    smart00250
    Location:35713607
    PLEC; Plectin repeat
    COG1196
    Location:21522754
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:751941
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:11671647
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:41854224
    Plectin; Plectin repeat
    pfam17902
    Location:927993
    SH3_10; SH3 domain
    pfam18373
    Location:10281105
    Spectrin_like; Spectrin like domain
    cd21188
    Location:128271
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:284389
    CH_SF; calponin homology (CH) domain superfamily
  3. XM_035525715.1XP_035381608.1  plectin a isoform X4

    UniProtKB/TrEMBL
    A0A4W4EKB9
    Conserved Domains (11) summary
    PTZ00121
    Location:14052365
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:617710
    SPEC; Spectrin repeats
    smart00250
    Location:35213557
    PLEC; Plectin repeat
    COG1196
    Location:21022704
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:712902
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:11171597
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:41354174
    Plectin; Plectin repeat
    pfam17902
    Location:888954
    SH3_10; SH3 domain
    pfam18373
    Location:9891066
    Spectrin_like; Spectrin like domain
    cd21188
    Location:128232
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:245350
    CH_SF; calponin homology (CH) domain superfamily
  4. XM_035525714.1XP_035381607.1  plectin a isoform X3

    UniProtKB/TrEMBL
    A0A4W4EKB9
    Related
    ENSEEEP00000061545.1, ENSEEET00000058672.1
    Conserved Domains (11) summary
    PTZ00121
    Location:14162376
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:617710
    SPEC; Spectrin repeats
    smart00250
    Location:35323568
    PLEC; Plectin repeat
    COG1196
    Location:21132715
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:712902
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:11281608
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:41464185
    Plectin; Plectin repeat
    pfam17902
    Location:888954
    SH3_10; SH3 domain
    pfam18373
    Location:9891066
    Spectrin_like; Spectrin like domain
    cd21188
    Location:128232
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:245350
    CH_SF; calponin homology (CH) domain superfamily
  5. XM_027019551.2XP_026875352.2  plectin a isoform X10

    UniProtKB/TrEMBL
    A0A4W4EJP0
    Conserved Domains (11) summary
    PTZ00121
    Location:13322292
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:533626
    SPEC; Spectrin repeats
    smart00250
    Location:34483484
    PLEC; Plectin repeat
    COG1196
    Location:20292631
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:628818
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:10441524
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:40624101
    Plectin; Plectin repeat
    pfam17902
    Location:804870
    SH3_10; SH3 domain
    pfam18373
    Location:905982
    Spectrin_like; Spectrin like domain
    cd21188
    Location:32148
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:161266
    CH_SF; calponin homology (CH) domain superfamily
  6. XM_027019547.2XP_026875348.2  plectin a isoform X6

    UniProtKB/TrEMBL
    A0A4W4EJP0
    Conserved Domains (11) summary
    PTZ00121
    Location:13592319
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:560653
    SPEC; Spectrin repeats
    smart00250
    Location:34753511
    PLEC; Plectin repeat
    COG1196
    Location:20562658
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:655845
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:10711551
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:40894128
    Plectin; Plectin repeat
    pfam17902
    Location:831897
    SH3_10; SH3 domain
    pfam18373
    Location:9321009
    Spectrin_like; Spectrin like domain
    cd21188
    Location:32175
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:188293
    CH_SF; calponin homology (CH) domain superfamily
  7. XM_027019554.2XP_026875355.2  plectin a isoform X13

    UniProtKB/TrEMBL
    A0A4W4EJP0
    Conserved Domains (11) summary
    PTZ00121
    Location:13192279
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:520613
    SPEC; Spectrin repeats
    smart00250
    Location:34353471
    PLEC; Plectin repeat
    COG1196
    Location:20162618
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:615805
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:10311511
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:40494088
    Plectin; Plectin repeat
    pfam17902
    Location:791857
    SH3_10; SH3 domain
    pfam18373
    Location:892969
    Spectrin_like; Spectrin like domain
    cd21188
    Location:19135
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:148253
    CH_SF; calponin homology (CH) domain superfamily
  8. XM_027019548.2XP_026875349.2  plectin a isoform X7

    UniProtKB/TrEMBL
    A0A4W4EJP0
    Conserved Domains (11) summary
    PTZ00121
    Location:13462306
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:547640
    SPEC; Spectrin repeats
    smart00250
    Location:34623498
    PLEC; Plectin repeat
    COG1196
    Location:20432645
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:642832
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:10581538
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:40764115
    Plectin; Plectin repeat
    pfam17902
    Location:818884
    SH3_10; SH3 domain
    pfam18373
    Location:919996
    Spectrin_like; Spectrin like domain
    cd21188
    Location:19162
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:175280
    CH_SF; calponin homology (CH) domain superfamily
  9. XM_027019556.2XP_026875357.2  plectin a isoform X15

    UniProtKB/TrEMBL
    A0A4W4EJP0
    Conserved Domains (11) summary
    PTZ00121
    Location:13172277
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:518611
    SPEC; Spectrin repeats
    smart00250
    Location:34333469
    PLEC; Plectin repeat
    COG1196
    Location:20142616
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:613803
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:10291509
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:40474086
    Plectin; Plectin repeat
    pfam17902
    Location:789855
    SH3_10; SH3 domain
    pfam18373
    Location:890967
    Spectrin_like; Spectrin like domain
    cd21188
    Location:17133
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:146251
    CH_SF; calponin homology (CH) domain superfamily
  10. XM_027019555.2XP_026875356.2  plectin a isoform X14

    UniProtKB/TrEMBL
    A0A4W4EJN5
    Related
    ENSEEEP00000012293.2, ENSEEET00000012437.2
    Conserved Domains (11) summary
    PTZ00121
    Location:13182278
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:530623
    SPEC; Spectrin repeats
    smart00250
    Location:34343470
    PLEC; Plectin repeat
    COG1196
    Location:20152617
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:625815
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:10301510
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:40484087
    Plectin; Plectin repeat
    pfam17902
    Location:801867
    SH3_10; SH3 domain
    pfam18373
    Location:902979
    Spectrin_like; Spectrin like domain
    cd21188
    Location:41145
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cd21238
    Location:158263
    CH_PLEC_rpt2; second calponin homology (CH) domain found in plectin and similar proteins
  11. XM_027019549.2XP_026875350.2  plectin a isoform X8

    UniProtKB/TrEMBL
    A0A4W4EJN5
    Conserved Domains (11) summary
    PTZ00121
    Location:13412301
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:542635
    SPEC; Spectrin repeats
    smart00250
    Location:34573493
    PLEC; Plectin repeat
    COG1196
    Location:20382640
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:637827
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:10531533
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:40714110
    Plectin; Plectin repeat
    pfam17902
    Location:813879
    SH3_10; SH3 domain
    pfam18373
    Location:914991
    Spectrin_like; Spectrin like domain
    cd21188
    Location:41157
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:170275
    CH_SF; calponin homology (CH) domain superfamily
  12. XM_027019546.2XP_026875347.2  plectin a isoform X5

    UniProtKB/TrEMBL
    A0A4W4EJN5
    Conserved Domains (11) summary
    PTZ00121
    Location:13682328
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:569662
    SPEC; Spectrin repeats
    smart00250
    Location:34843520
    PLEC; Plectin repeat
    COG1196
    Location:20652667
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:664854
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:10801560
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:40984137
    Plectin; Plectin repeat
    pfam17902
    Location:840906
    SH3_10; SH3 domain
    pfam18373
    Location:9411018
    Spectrin_like; Spectrin like domain
    cd21188
    Location:41184
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:197302
    CH_SF; calponin homology (CH) domain superfamily
  13. XM_027019553.2XP_026875354.2  plectin a isoform X12

    UniProtKB/TrEMBL
    A0A4W4EJN6
    Related
    ENSEEEP00000012297.2, ENSEEET00000012441.2
    Conserved Domains (11) summary
    PTZ00121
    Location:13192279
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:531624
    SPEC; Spectrin repeats
    smart00250
    Location:34353471
    PLEC; Plectin repeat
    COG1196
    Location:20162618
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:626816
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:10311511
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:40494088
    Plectin; Plectin repeat
    pfam17902
    Location:802868
    SH3_10; SH3 domain
    pfam18373
    Location:903980
    Spectrin_like; Spectrin like domain
    cd21188
    Location:42146
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cd21238
    Location:159264
    CH_PLEC_rpt2; second calponin homology (CH) domain found in plectin and similar proteins
  14. XM_027019552.2XP_026875353.2  plectin a isoform X11

    UniProtKB/TrEMBL
    A0A4W4EJN6
    Related
    ENSEEEP00000012298.2, ENSEEET00000012442.2
    Conserved Domains (11) summary
    PTZ00121
    Location:13302290
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:531624
    SPEC; Spectrin repeats
    smart00250
    Location:34463482
    PLEC; Plectin repeat
    COG1196
    Location:20272629
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:626816
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:10421522
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:40604099
    Plectin; Plectin repeat
    pfam17902
    Location:802868
    SH3_10; SH3 domain
    pfam18373
    Location:903980
    Spectrin_like; Spectrin like domain
    cd21188
    Location:42146
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cd21238
    Location:159264
    CH_PLEC_rpt2; second calponin homology (CH) domain found in plectin and similar proteins
  15. XM_027019550.2XP_026875351.2  plectin a isoform X9

    UniProtKB/TrEMBL
    A0A4W4EJP0
    Conserved Domains (11) summary
    PTZ00121
    Location:13402300
    PTZ00121; MAEBL; Provisional
    smart00150
    Location:541634
    SPEC; Spectrin repeats
    smart00250
    Location:34563492
    PLEC; Plectin repeat
    COG1196
    Location:20372639
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:636826
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam15921
    Location:10521532
    CCDC158; Coiled-coil domain-containing protein 158
    pfam00681
    Location:40704109
    Plectin; Plectin repeat
    pfam17902
    Location:812878
    SH3_10; SH3 domain
    pfam18373
    Location:913990
    Spectrin_like; Spectrin like domain
    cd21188
    Location:13156
    CH_PLEC-like_rpt1; first calponin homology (CH) domain found in the plectin/dystonin/MACF1 family
    cl00030
    Location:169274
    CH_SF; calponin homology (CH) domain superfamily