U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hs6st3a heparan sulfate 6-O-sulfotransferase 3a [ Electrophorus electricus (electric eel) ]

Gene ID: 113580001, updated on 18-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
hs6st3a
Gene description
heparan sulfate 6-O-sulfotransferase 3a
See related
Ensembl:ENSEEEG00000006330
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See hs6st3a in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 1 NC_049535.1 (13536800..13569286)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020825950.1 (1215343..1247771, complement)

Chromosome 1 - NC_049535.1Genomic Context describing neighboring genes Neighboring gene claudin 10d Neighboring gene DAZ interacting zinc finger protein 1 Neighboring gene DDB1- and CUL4-associated factor 6-like Neighboring gene G protein-coupled receptor 161a

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
heparan-sulfate 6-O-sulfotransferase 3-B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049535.1 Reference fEleEle1.pri

    Range
    13536800..13569286
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035529939.1 → XP_035385832.1  heparan-sulfate 6-O-sulfotransferase 3-B isoform X1

    UniProtKB/TrEMBL
    A0A4W4EKL0
    Related
    ENSEEEP00000012621.2, ENSEEET00000012768.2
    Conserved Domains (1) summary
    pfam03567
    Location:94 → 310
    Sulfotransfer_2; Sulfotransferase family

  2. XM_035529941.1 → XP_035385834.1  heparan-sulfate 6-O-sulfotransferase 3-B isoform X2

    UniProtKB/TrEMBL
    A0A4W4EKL0
    Conserved Domains (1) summary
    pfam03567
    Location:94 → 310
    Sulfotransfer_2; Sulfotransferase family

  3. XM_035529945.1 → XP_035385838.1  heparan-sulfate 6-O-sulfotransferase 3-B isoform X2

    UniProtKB/TrEMBL
    A0A4W4EKL0
    Conserved Domains (1) summary
    pfam03567
    Location:94 → 310
    Sulfotransfer_2; Sulfotransferase family

RNA

  1. XR_004776484.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases