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b3gat3 beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [ Electrophorus electricus (electric eel) ]

Gene ID: 113579800, updated on 18-Jun-2024

Summary

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Gene symbol
b3gat3
Gene description
beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
See related
Ensembl:ENSEEEG00000023346
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
human zebrafish all
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Genomic context

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See b3gat3 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
5
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 19 NC_049553.1 (6467078..6469974, complement)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826152.1 (343643..346540, complement)

Chromosome 19 - NC_049553.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113579822 Neighboring gene small nucleolar RNA SNORD29 Neighboring gene uncharacterized sb:cb1058 Neighboring gene N-alpha-acetyltransferase 40, NatD catalytic subunit Neighboring gene REST corepressor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049553.1 Reference fEleEle1.pri

    Range
    6467078..6469974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027013984.2 → XP_026869785.2  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

    UniProtKB/TrEMBL
    A0A4W4HK87
    Related
    ENSEEEP00000049632.2, ENSEEET00000050176.2
    Conserved Domains (1) summary
    cd00218
    Location:73 → 308
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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