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sfrp1a secreted frizzled-related protein 1a [ Electrophorus electricus (electric eel) ]

Gene ID: 113576905, updated on 18-Jun-2024

Summary

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Gene symbol
sfrp1a
Gene description
secreted frizzled-related protein 1a
See related
Ensembl:ENSEEEG00000023202
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
zebrafish all
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Genomic context

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See sfrp1a in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 5 NC_049539.1 (17416180..17429099)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826073.1 (26966..39725, complement)

Chromosome 5 - NC_049539.1Genomic Context describing neighboring genes Neighboring gene histone H1 Neighboring gene lysyl oxidase-like 2b Neighboring gene uncharacterized LOC113576943 Neighboring gene NACHT, LRR and PYD domains-containing protein 12-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted frizzled-related protein 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049539.1 Reference fEleEle1.pri

    Range
    17416180..17429099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027009256.2 → XP_026865057.1  secreted frizzled-related protein 1a

    UniProtKB/TrEMBL
    A0A4W4HH04
    Related
    ENSEEEP00000049389.1, ENSEEET00000049926.2
    Conserved Domains (2) summary
    cd03580
    Location:171 → 294
    NTR_Sfrp1_like; NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins similar to human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins containing an NTR domain C-terminal to a cysteine-rich Frizzled domain. They show diverse ...
    cl02447
    Location:40 → 161
    CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
Nucleotide Protein
Heading Accession and Version

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