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gyg1a glycogenin 1a [ Electrophorus electricus (electric eel) ]

Gene ID: 113576495, updated on 18-Jun-2024

Summary

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Gene symbol
gyg1a
Gene description
glycogenin 1a
See related
Ensembl:ENSEEEG00000028991
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Also known as
gyg1
Orthologs
zebrafish all
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Genomic context

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See gyg1a in Genome Data Viewer
Location:
chromosome: 15
Exon count:
10
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 15 NC_049549.1 (7148856..7157349, complement)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826064.1 (75458..82976)

Chromosome 15 - NC_049549.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member G2a Neighboring gene helicase-like transcription factor Neighboring gene angiotensin II receptor, type 1a Neighboring gene RAB3A, member RAS oncogene family, a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-1a
Names
glycogenin 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049549.1 Reference fEleEle1.pri

    Range
    7148856..7157349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035534318.1 → XP_035390211.1  glycogenin-1a isoform X3

    UniProtKB/TrEMBL
    A0A4W4EE71
    Conserved Domains (1) summary
    cd02537
    Location:4 → 236
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_027008589.2 → XP_026864390.2  glycogenin-1a isoform X1

    UniProtKB/TrEMBL
    A0A4W4EE71
    Related
    ENSEEEP00000060400.1, ENSEEET00000055312.1
    Conserved Domains (1) summary
    cd02537
    Location:4 → 250
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  3. XM_027008590.2 → XP_026864391.2  glycogenin-1a isoform X2

    UniProtKB/TrEMBL
    A0A4W4EB82
    Related
    ENSEEEP00000053070.1, ENSEEET00000054594.1
    Conserved Domains (1) summary
    cd02537
    Location:1 → 231
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  4. XM_035534319.1 → XP_035390212.1  glycogenin-1a isoform X4

    UniProtKB/TrEMBL
    A0A4W4EB82
    Conserved Domains (1) summary
    cd02537
    Location:1 → 213
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
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