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chst7 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 [ Electrophorus electricus (electric eel) ]

Gene ID: 113574578, updated on 15-Mar-2024

Summary

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Gene symbol
chst7
Gene description
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
human zebrafish all
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Genomic context

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See chst7 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 3 NC_049537.1 (7425412..7429960, complement)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826030.1 (7219..11798, complement)

Chromosome 3 - NC_049537.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118241049 Neighboring gene jade family PHD finger 3 Neighboring gene RP2 activator of ARL3 GTPase Neighboring gene solute carrier family 9 member 7 Neighboring gene tubulin gamma complex component 5 Neighboring gene cytoplasmic FMR1 interacting protein 1 Neighboring gene fibronectin type III domain-containing protein 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049537.1 Reference fEleEle1.pri

    Range
    7425412..7429960 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027005589.2 → XP_026861390.2  carbohydrate sulfotransferase 7

    UniProtKB/TrEMBL
    A0A4W4GJD9
    Conserved Domains (1) summary
    cl21551
    Location:219 → 409
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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