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dpy19l3 dpy-19 like C-mannosyltransferase 3 [ Electrophorus electricus (electric eel) ]

Gene ID: 113574096, updated on 18-Jun-2024

Summary

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Gene symbol
dpy19l3
Gene description
dpy-19 like C-mannosyltransferase 3
See related
Ensembl:ENSEEEG00000020207
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
human zebrafish all
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Genomic context

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See dpy19l3 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
23
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 21 NC_049555.1 (9718270..9745772)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826022.1 (532694..558689, complement)

Chromosome 21 - NC_049555.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118240461 Neighboring gene neural-cadherin Neighboring gene zinc finger protein 507 Neighboring gene MTSS I-BAR domain containing 2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049555.1 Reference fEleEle1.pri

    Range
    9718270..9745772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035520920.1 → XP_035376813.1  probable C-mannosyltransferase DPY19L3 isoform X2

    UniProtKB/TrEMBL
    A0A4W4H278
    Conserved Domains (1) summary
    pfam10034
    Location:56 → 710
    Dpy19; Q-cell neuroblast polarisation

  2. XM_035520919.1 → XP_035376812.1  probable C-mannosyltransferase DPY19L3 isoform X2

    UniProtKB/TrEMBL
    A0A4W4H278
    Related
    ENSEEEP00000042833.2, ENSEEET00000043321.2
    Conserved Domains (1) summary
    pfam10034
    Location:56 → 710
    Dpy19; Q-cell neuroblast polarisation

  3. XM_035520923.1 → XP_035376816.1  probable C-mannosyltransferase DPY19L3 isoform X3

    UniProtKB/TrEMBL
    A0A4W4H278
    Conserved Domains (1) summary
    pfam10034
    Location:55 → 709
    Dpy19; Q-cell neuroblast polarisation

  4. XM_035520921.1 → XP_035376814.1  probable C-mannosyltransferase DPY19L3 isoform X2

    UniProtKB/TrEMBL
    A0A4W4H278
    Conserved Domains (1) summary
    pfam10034
    Location:56 → 710
    Dpy19; Q-cell neuroblast polarisation

  5. XM_035520922.1 → XP_035376815.1  probable C-mannosyltransferase DPY19L3 isoform X2

    UniProtKB/TrEMBL
    A0A4W4H278
    Conserved Domains (1) summary
    pfam10034
    Location:56 → 710
    Dpy19; Q-cell neuroblast polarisation

  6. XM_035520925.1 → XP_035376818.1  probable C-mannosyltransferase DPY19L3 isoform X5

    UniProtKB/TrEMBL
    A0A4W4H278
    Conserved Domains (1) summary
    pfam10034
    Location:1 → 610
    Dpy19; Q-cell neuroblast polarisation

  7. XM_035520918.1 → XP_035376811.1  probable C-mannosyltransferase DPY19L3 isoform X1

    UniProtKB/TrEMBL
    A0A4W4H278
    Conserved Domains (1) summary
    pfam10034
    Location:73 → 725
    Dpy19; Q-cell neuroblast polarisation

  8. XM_035520924.1 → XP_035376817.1  probable C-mannosyltransferase DPY19L3 isoform X4

    UniProtKB/TrEMBL
    A0A4W4H278
    Conserved Domains (1) summary
    pfam10034
    Location:58 → 689
    Dpy19; Q-cell neuroblast polarisation
Nucleotide Protein
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