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fut7 fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [ Electrophorus electricus (electric eel) ]

Gene ID: 113573456, updated on 8-Aug-2024

Summary

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Gene symbol
fut7
Gene description
fucosyltransferase 7 (alpha (1,3) fucosyltransferase)
See related
Ensembl:ENSEEEG00000028928
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
human zebrafish all
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Genomic context

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See fut7 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 6 NC_049540.1 (25287243..25291880)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826011.1 (1243661..1247375, complement)

Chromosome 6 - NC_049540.1Genomic Context describing neighboring genes Neighboring gene patatin-like phospholipase domain containing 7a Neighboring gene uncharacterized LOC113573457 Neighboring gene chloride intracellular channel 3 Neighboring gene POU domain, class 5, transcription factor 3 Neighboring gene neural proliferation, differentiation and control, 1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049540.1 Reference fEleEle1.pri

    Range
    25287243..25291880
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027003725.2 → XP_026859526.2  alpha-(1,3)-fucosyltransferase 7

    UniProtKB/TrEMBL
    A0A4W4G9Y4
    Related
    ENSEEEP00000055578.1, ENSEEET00000055757.1
    Conserved Domains (2) summary
    pfam00852
    Location:194 → 348
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:65 → 172
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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